Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004191.1 Hibiscus syriacus cultivar Beakdansim tig00009169_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85111

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
594--634
15
2.9
14
85
7
55
19
0
39
41
1.52
591--634
22
2.0
22
90
0
70
25
0
36
38
1.56
638--677
21
2.0
21
85
14
57
57
0
0
42
0.98
640--717
20
3.6
21
76
13
61
61
0
0
38
0.96
7747--7823
39
2.0
39
100
0
154
35
12
7
44
1.72
19242--19267
3
8.7
3
100
0
52
0
30
0
69
0.89
24194--24266
6
11.8
6
84
5
92
0
16
50
32
1.45
39974--40016
21
2.0
21
86
0
59
30
27
25
16
1.97
40087--40118
16
1.9
17
93
6
57
81
0
18
0
0.70
46215--46239
4
6.2
4
100
0
50
24
0
0
76
0.80
47616--47686
36
2.0
36
94
0
124
18
19
25
36
1.94
48710--49001
36
8.0
36
84
4
343
29
23
27
19
1.98
49732--49771
17
2.3
18
86
8
64
25
2
2
70
1.13
55517--55541
2
12.5
2
100
0
50
52
0
0
48
1.00
57260--57286
2
13.5
2
100
0
54
48
0
0
51
1.00
60927--60979
13
4.2
13
70
4
54
28
11
18
41
1.85
63833--63890
23
2.5
24
75
8
57
25
1
5
67
1.21
73592--73640
3
16.3
3
100
0
98
65
0
0
34
0.93
75037--75119
2
45.5
2
82
17
110
50
0
0
49
1.00
75043--75119
32
2.4
32
100
0
154
50
0
0
49
1.00
77049--77092
20
2.1
20
87
8
61
61
0
0
38
0.96
79193--79226
17
2.1
17
89
10
54
38
11
17
32
1.86

Tables:   1

The End!