Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004192.1 Hibiscus syriacus cultivar Beakdansim tig00009170_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68264

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111--294
87
2.1
87
93
0
314
22
16
27
33
1.95
5408--5441
9
3.8
9
88
0
50
58
0
2
38
1.13
10009--10077
19
3.4
20
73
18
63
50
1
1
46
1.19
10588--10671
22
3.7
22
82
4
96
0
72
0
27
0.85
10594--10665
32
2.2
32
85
0
99
0
73
0
26
0.83
10594--10675
6
13.3
6
82
14
87
0
75
0
24
0.80
22260--22300
14
2.9
14
80
20
50
39
0
4
56
1.21
28797--28824
5
5.6
5
100
0
56
39
0
0
60
0.97
30834--30883
20
2.6
19
83
3
55
36
12
2
50
1.51
36285--36522
5
48.4
5
89
10
368
58
0
0
41
0.98
39327--39371
21
2.1
21
91
0
72
8
28
37
24
1.86
43578--43656
31
2.5
31
95
0
140
39
21
20
18
1.93
44610--44654
21
2.1
21
83
0
54
15
22
31
31
1.95
47759--47852
31
3.0
31
87
3
127
39
23
17
20
1.92
48811--48855
21
2.1
21
83
0
54
15
22
31
31
1.95
51847--51940
31
3.0
31
92
3
145
37
23
19
20
1.94
52949--52994
24
2.0
23
88
12
69
41
15
4
39
1.67
55076--55394
174
1.8
176
88
1
498
32
12
12
42
1.81
56392--56592
43
4.7
43
78
9
160
49
5
18
25
1.69
56430--56610
42
4.1
44
82
9
192
47
6
18
27
1.72
59094--59122
6
4.8
6
100
0
58
34
0
51
13
1.42

Tables:   1

The End!