Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004196.1 Hibiscus syriacus cultivar Beakdansim tig00009175_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79932

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1514--1567
19
2.8
19
82
2
63
38
12
12
35
1.82
12951--13022
17
4.2
17
81
10
67
38
9
12
38
1.76
12978--13021
18
2.5
18
89
10
65
43
13
6
36
1.71
20777--20819
24
1.9
23
81
13
54
53
6
37
2
1.41
23393--23423
15
2.1
15
100
0
62
25
12
29
32
1.93
31708--31739
12
2.7
12
100
0
64
28
18
37
15
1.92
31795--31903
29
3.8
29
92
2
175
14
30
32
22
1.94
32090--32141
25
2.1
25
96
0
95
26
9
34
28
1.88
32154--32199
23
2.0
23
91
0
74
47
4
34
13
1.62
32154--32214
23
2.6
23
81
5
59
50
6
32
9
1.61
32204--32256
21
2.5
21
96
0
97
62
0
35
1
1.06
32202--32233
17
1.9
16
93
6
55
62
0
37
0
0.95
32419--32550
45
3.0
45
80
14
134
40
0
12
47
1.41
32712--32758
16
3.0
16
84
9
53
29
0
10
59
1.31
32733--32763
15
2.1
14
94
5
53
38
0
6
54
1.26
34893--35232
26
13.6
25
78
13
294
42
10
2
44
1.51
34893--35296
26
16.4
23
74
13
149
43
9
2
44
1.51
34858--35290
124
3.5
124
99
0
859
43
10
2
43
1.51
34925--35235
12
22.9
14
68
21
76
43
10
2
43
1.52
38117--38175
26
2.3
24
78
16
64
40
3
8
47
1.51
38984--39046
28
2.2
30
91
5
103
57
11
0
31
1.34
38988--39053
28
2.4
28
85
10
98
56
10
0
33
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39023--39071
21
2.3
21
85
3
71
53
16
0
30
1.43
39527--39580
16
3.4
16
84
5
83
16
55
7
20
1.65
39540--39586
15
3.1
15
81
6
67
17
57
6
19
1.60
39527--39586
31
1.9
31
100
0
120
16
56
6
20
1.62
39633--39722
29
3.1
29
87
6
137
17
32
34
15
1.92
58861--58907
21
2.2
21
96
0
85
25
23
21
29
1.99
78766--78930
41
3.8
43
79
10
160
27
20
6
46
1.73

Tables:   1

The End!