Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004200.1 Hibiscus syriacus cultivar Beakdansim tig00009192_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31256

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--124
30
2.3
31
73
19
72
35
16
1
46
1.56
4166--4198
17
1.9
17
100
0
66
48
12
3
36
1.56
4608--4649
17
2.5
17
77
11
50
28
11
0
59
1.33
8149--8206
23
2.8
20
82
15
57
44
17
20
17
1.86
8147--8261
24
4.8
24
84
5
135
40
17
18
23
1.91
11760--12103
170
2.0
172
93
1
584
25
25
11
38
1.89
14643--14853
76
2.8
77
85
5
259
20
22
32
24
1.98
17487--17725
36
6.8
33
70
17
101
41
9
3
44
1.55
17505--17652
36
4.3
34
73
15
117
40
8
4
46
1.54
17557--17760
35
5.8
35
76
10
157
42
9
3
44
1.55
17592--17760
71
2.4
70
85
4
216
43
8
2
44
1.50
17592--17760
36
4.8
35
78
9
128
43
8
2
44
1.50
19687--19769
32
2.6
32
92
0
130
38
20
8
32
1.83
22311--22357
17
2.7
17
81
12
60
72
0
12
14
1.13
22460--22515
16
3.2
17
77
10
60
73
0
3
23
0.99
22495--22586
37
2.6
36
80
11
116
65
2
4
28
1.23
22645--22672
14
2.0
14
100
0
56
64
0
0
35
0.94
22692--22728
14
2.6
14
95
0
65
70
0
0
29
0.88
24408--24556
68
2.3
63
81
9
165
38
8
20
32
1.82
24701--24915
105
2.0
105
82
3
254
22
18
23
35
1.96
25491--25608
32
3.8
32
83
6
134
34
22
13
29
1.92
26709--26757
11
4.1
12
85
15
57
0
12
2
85
0.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26693--26768
32
2.4
32
81
0
89
2
14
2
80
0.93
26709--26757
24
2.0
24
88
7
73
0
12
2
85
0.68
26709--26763
12
4.3
13
86
6
60
0
12
1
85
0.68
31128--31185
17
3.6
16
73
11
55
74
5
5
15
1.18
31129--31212
33
2.5
35
76
7
93
72
4
5
16
1.22

Tables:   1

The End!