Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004202.1 Hibiscus syriacus cultivar Beakdansim tig00009196_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71071

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8313--8365
27
2.0
27
92
0
88
39
20
13
26
1.89
9706--9870
3
55.0
3
96
0
303
66
1
0
32
1.04
16318--16353
17
2.1
17
94
0
63
44
11
30
13
1.79
22552--22668
46
2.5
46
97
0
216
35
21
17
25
1.95
22684--22752
35
1.9
36
97
2
131
43
18
20
17
1.88
26590--26618
14
2.0
15
93
6
51
20
6
17
55
1.65
29448--29490
11
3.8
11
82
11
52
16
11
0
72
1.13
31823--31867
20
2.3
20
88
3
65
42
2
17
37
1.62
33651--33686
2
18.5
2
94
5
65
50
0
0
50
1.00
45239--45364
39
3.1
40
70
15
123
46
3
6
42
1.47
45412--45658
92
2.6
94
81
7
263
44
7
8
39
1.64
45674--45700
2
13.5
2
100
0
54
51
0
0
48
1.00
45401--45687
92
3.1
91
78
9
226
43
6
8
40
1.62
45823--45856
18
1.9
18
88
5
52
52
5
2
38
1.41
46882--46915
17
2.1
17
88
5
52
29
17
8
44
1.79
47474--47518
24
1.9
24
90
4
74
33
20
24
22
1.97
47471--47546
23
3.2
24
80
10
79
38
22
21
18
1.94
47517--47564
23
2.1
23
84
7
62
41
27
16
14
1.87
55205--55245
18
2.2
18
86
4
55
29
2
2
65
1.18
56727--56798
36
2.0
36
97
0
135
40
18
13
27
1.88
57265--57346
43
1.9
43
92
2
139
35
8
18
37
1.81
57422--57461
6
5.9
7
83
16
57
15
17
10
57
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57422--57461
13
2.9
14
86
13
57
15
17
10
57
1.64
60408--60482
10
7.1
10
77
15
71
82
1
14
1
0.80
60402--60482
9
8.9
9
80
10
76
81
1
16
1
0.82
60410--60482
35
2.1
35
87
5
103
82
1
15
1
0.81
60402--60482
15
5.5
15
77
10
69
81
1
16
1
0.82
60402--60456
26
2.1
26
86
10
76
85
0
14
0
0.60
60412--60487
19
4.1
19
78
11
68
78
1
15
3
0.96
61581--61753
78
2.2
76
82
8
215
32
13
23
30
1.93
62128--62239
54
2.1
54
86
0
152
36
14
19
29
1.91
63306--63785
73
6.6
73
92
0
791
32
16
12
38
1.85
63817--64004
39
4.8
39
87
0
268
43
11
25
20
1.84
63941--64272
123
2.7
123
91
0
522
40
15
17
26
1.89
65733--65761
2
14.5
2
100
0
58
51
0
0
48
1.00
65771--65811
18
2.2
18
91
4
64
29
2
0
68
1.03
69039--69075
19
1.9
19
88
0
56
51
0
2
45
1.15

Tables:   1

The End!