Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004203.1 Hibiscus syriacus cultivar Beakdansim tig00009198_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49842

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--151
13
3.4
14
82
5
51
34
30
0
34
1.58
296--340
18
2.5
18
96
0
81
20
33
26
20
1.97
669--716
14
3.5
14
88
2
71
27
25
8
39
1.84
1434--1489
21
2.7
21
91
0
94
35
19
19
25
1.95
2195--2368
45
3.9
45
89
2
251
21
20
11
45
1.82
2916--2971
21
2.7
21
97
0
103
35
19
12
32
1.89
8992--9359
45
8.2
45
88
1
454
22
21
11
45
1.83
8992--9359
89
4.1
90
89
1
542
22
21
11
45
1.83
9141--9206
25
3.1
20
67
23
53
19
27
12
40
1.87
9147--9213
19
3.2
19
70
22
62
20
23
14
40
1.90
8992--9359
134
2.7
135
90
1
569
22
21
11
45
1.83
9774--9829
20
2.7
21
80
8
69
26
16
14
42
1.86
9912--9957
21
2.2
21
100
0
92
32
19
13
34
1.90
20320--20358
14
2.8
14
92
0
60
28
7
15
48
1.72
21100--21208
47
2.3
46
80
9
121
33
17
13
34
1.89
21962--22098
37
3.6
37
88
6
170
42
3
8
45
1.51
21990--22104
37
3.1
37
90
7
173
42
5
6
45
1.53
22100--22144
23
2.0
23
82
8
56
26
2
0
71
0.98
23367--23424
23
2.5
23
80
8
64
18
5
1
74
1.10
26117--26370
94
2.7
95
87
5
343
31
16
19
31
1.94
26117--26383
95
2.8
92
82
11
288
31
16
19
31
1.95
27540--27710
84
2.0
84
86
4
238
33
25
19
21
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31424--32175
84
9.0
83
84
3
773
34
24
18
23
1.96
32743--32774
2
16.0
2
100
0
64
50
0
0
50
1.00
32755--33018
37
7.2
37
76
18
227
46
4
6
43
1.47
32799--33099
37
8.7
35
73
18
197
46
3
6
43
1.46
32897--32953
27
2.1
28
84
9
75
42
1
7
49
1.40
32909--32966
27
2.0
28
83
9
73
43
3
5
48
1.42
32872--33003
67
2.0
64
82
10
160
45
3
4
46
1.41
32979--33045
30
2.2
30
84
5
82
46
1
7
44
1.40
33107--33163
7
8.0
7
90
3
78
22
0
3
73
0.98
33107--33163
11
5.3
11
76
19
57
22
0
3
73
0.98
34383--34440
21
2.8
20
84
12
73
12
13
0
74
1.08
34381--34458
19
3.9
20
82
12
81
12
14
0
73
1.11
34423--34478
27
2.0
29
83
13
73
17
5
0
76
0.96
34423--34573
23
6.4
23
67
21
64
15
8
1
74
1.15
34522--34577
14
4.0
14
83
6
69
10
12
0
76
1.01
34493--34566
9
8.4
9
72
19
50
9
10
2
77
1.10
35983--36021
20
2.0
20
84
0
51
58
5
0
35
1.20
36015--36067
25
2.1
26
82
10
65
62
7
0
30
1.23
45145--45303
60
2.6
61
87
1
230
28
27
18
25
1.98
46734--46776
19
2.3
19
84
8
52
39
20
0
39
1.53
48949--48978
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!