Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004219.1 Hibiscus syriacus cultivar Beakdansim tig00009239_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55877

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3252--3360
20
5.4
20
86
9
152
29
15
24
30
1.96
5163--5531
60
6.2
59
89
2
512
38
11
22
26
1.89
5163--5531
180
2.1
175
90
2
567
38
11
22
26
1.89
10330--10382
17
3.1
17
88
0
79
37
13
7
41
1.72
14036--14527
60
8.2
60
90
1
761
36
13
23
26
1.92
19138--19177
19
2.1
19
100
0
80
52
17
15
15
1.75
22814--22848
17
2.1
17
100
0
70
28
31
0
40
1.57
28212--28332
59
2.1
59
90
0
188
34
22
17
25
1.95
33001--33051
20
2.5
20
84
6
59
39
0
23
37
1.55
34396--34595
24
8.3
23
71
10
100
19
22
20
38
1.94
34395--34511
49
2.4
48
80
9
139
18
21
20
39
1.93
38683--38744
21
3.0
21
85
0
88
24
24
22
29
1.99
38885--38955
36
1.9
37
86
8
101
26
19
29
23
1.98
43226--43288
32
2.0
31
90
3
99
26
25
12
34
1.92
55825--55865
2
21.0
2
95
5
75
51
0
0
48
1.00

Tables:   1

The End!