Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004220.1 Hibiscus syriacus cultivar Beakdansim tig00009240_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45320

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4919--4973
22
2.5
22
82
11
69
18
50
18
12
1.77
9493--9554
5
12.0
5
81
11
63
20
58
14
6
1.59
9493--9539
16
2.9
16
90
3
76
23
57
10
8
1.60
15604--15649
17
2.6
17
79
3
56
30
19
8
41
1.82
17165--17203
20
1.9
21
85
15
55
69
0
28
2
1.02
20316--20350
18
1.9
18
88
0
52
54
0
17
28
1.43
21488--21575
24
3.7
24
85
0
113
22
20
19
37
1.94
26536--26581
19
2.4
20
79
17
53
43
4
2
50
1.34
40981--41049
27
2.6
27
97
0
129
21
21
27
28
1.99
43929--43993
25
2.5
26
80
7
69
60
1
16
21
1.45
45042--45080
20
2.0
20
89
0
60
46
7
12
33
1.71

Tables:   1

The End!