Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004224.1 Hibiscus syriacus cultivar Beakdansim tig00009246_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34927

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2538--2590
22
2.2
24
83
9
65
81
3
15
0
0.83
3515--4407
106
8.7
105
79
10
924
34
24
18
22
1.96
3526--4324
200
4.0
200
90
0
1204
34
25
18
22
1.96
3511--4324
306
2.7
298
80
10
845
34
25
18
22
1.96
6203--6315
2
57.5
2
77
10
108
42
3
1
52
1.29
6189--6318
34
3.9
32
76
11
122
40
3
1
54
1.25
6594--6625
15
2.0
17
88
11
50
21
6
0
71
1.07
6609--6666
23
2.5
22
74
17
64
18
10
1
68
1.26
9094--9132
2
19.5
2
100
0
78
48
0
0
51
1.00
10213--10267
15
3.6
15
74
11
58
21
34
25
18
1.96
10306--10360
15
3.4
16
82
7
67
25
29
30
14
1.95
14383--14442
29
2.1
29
96
0
111
36
11
1
50
1.49
18081--18143
19
3.5
18
79
14
76
41
12
12
33
1.81
18096--18140
18
2.5
18
82
10
56
42
8
13
35
1.75
21607--22882
635
2.0
635
94
0
2241
30
24
21
23
1.99
29253--29327
19
3.7
19
67
19
53
46
2
16
34
1.61
31113--31263
65
2.3
66
89
4
225
30
2
43
23
1.67
33047--33109
27
2.3
27
86
0
90
20
22
15
41
1.90

Tables:   1

The End!