Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004236.1 Hibiscus syriacus cultivar Beakdansim tig00009281_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47518

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1237--1647
177
2.4
176
80
10
436
40
12
13
33
1.82
1835--1923
38
2.3
40
84
9
121
49
8
13
28
1.72
1858--1919
20
3.2
19
75
8
63
48
6
12
32
1.67
4067--4096
15
2.0
15
93
0
51
40
23
13
23
1.90
6046--6075
15
2.0
15
93
0
51
40
23
13
23
1.90
8022--8051
15
2.0
15
93
0
51
40
23
13
23
1.90
9999--10028
15
2.0
15
93
0
51
40
23
13
23
1.90
11916--11945
15
2.0
15
93
0
51
40
23
13
23
1.90
15870--15899
15
2.0
15
93
0
51
40
23
13
23
1.90
16331--16567
130
1.8
129
80
10
286
39
12
13
34
1.83
16539--16990
200
2.3
200
88
0
663
39
13
12
34
1.82
17173--17859
226
3.0
224
85
3
878
33
14
12
38
1.84
21422--21879
226
2.0
226
95
0
819
43
3
7
46
1.48
25622--25715
35
2.7
35
77
6
100
32
19
10
37
1.86
25939--26193
142
1.8
141
83
8
340
40
16
9
34
1.80
25884--26229
138
2.5
138
78
6
367
37
17
10
35
1.84
27705--27731
13
2.1
13
100
0
54
0
29
40
29
1.57
41761--41980
49
4.6
49
81
6
249
28
20
15
35
1.94

Tables:   1

The End!