Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004239.1 Hibiscus syriacus cultivar Beakdansim tig00009289_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69493

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3402--3436
13
2.6
13
90
4
52
34
0
14
51
1.42
4278--4322
22
2.0
22
95
0
81
31
24
17
26
1.97
20509--20561
18
2.9
18
97
0
97
26
33
18
20
1.96
26680--26719
20
2.0
20
85
0
53
25
12
5
57
1.55
27946--27986
21
1.9
22
85
5
57
26
17
14
41
1.88
40791--40843
27
2.0
27
85
14
74
58
1
13
26
1.45
41254--41923
2
337.0
2
64
19
203
48
3
4
43
1.40
41268--41395
9
14.7
9
66
28
55
46
7
1
44
1.40
41275--41304
13
2.3
13
94
0
51
53
10
0
36
1.35
41208--41345
54
2.6
54
90
4
210
47
5
3
43
1.45
41253--41922
11
60.1
11
66
18
135
48
3
4
43
1.40
41419--41483
31
2.0
33
85
5
89
47
3
6
43
1.43
41466--41514
15
3.2
16
74
8
57
44
2
2
51
1.24
41542--41581
19
2.2
18
83
12
55
40
2
5
52
1.37
41578--41656
29
2.8
28
76
18
74
48
1
6
44
1.36
41692--42174
22
23.2
21
71
21
171
53
2
6
37
1.41
41840--42174
115
2.9
114
82
10
362
54
2
7
36
1.42
42959--42992
17
2.0
17
94
0
59
47
17
14
20
1.83
42996--43025
14
2.1
14
93
0
51
36
16
20
26
1.93
43192--43232
14
3.0
14
82
13
50
39
14
4
41
1.67
45276--45316
21
1.9
22
90
5
66
26
14
14
43
1.84
47759--47813
20
2.8
20
82
0
65
27
27
7
38
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58366--58418
27
2.0
27
85
14
74
58
1
13
26
1.45
58747--59522
2
384.5
2
65
19
226
49
4
4
41
1.42
58763--58945
13
14.2
13
69
17
55
48
7
2
42
1.45
58813--58962
9
16.9
9
71
19
86
46
8
1
44
1.41
58811--58900
45
1.9
47
89
10
141
47
8
0
43
1.34
59180--59579
22
18.3
21
70
21
174
53
2
5
39
1.37
59094--59508
77
5.6
75
70
23
212
51
2
5
40
1.37
59144--59522
120
3.4
110
76
14
327
52
2
5
39
1.36
59370--59777
8
54.9
8
70
26
139
52
2
6
37
1.42
59375--59777
22
18.5
22
71
24
181
53
2
6
37
1.42
59566--59756
58
3.4
56
77
15
182
52
3
7
36
1.47
59648--59780
43
3.3
40
78
21
145
54
2
7
35
1.41
60591--60620
14
2.1
14
93
0
51
36
16
20
26
1.93
61988--62018
16
2.0
16
93
6
55
61
6
12
19
1.53
64661--64711
14
3.8
14
82
7
61
68
0
25
5
1.12
69063--69116
19
2.7
21
75
18
53
25
18
0
55
1.43
67906--69274
467
3.0
467
87
8
2075
37
13
9
39
1.77

Tables:   1

The End!