Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004253.1 Hibiscus syriacus cultivar Beakdansim tig00009324_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37608

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8282--8314
14
2.5
14
90
9
52
60
0
0
39
0.97
13628--13667
21
1.9
21
85
10
55
30
0
7
62
1.23
14063--14098
18
2.1
17
89
5
54
41
8
13
36
1.75
14958--14989
2
16.0
2
100
0
64
50
0
0
50
1.00
15158--15209
24
2.1
25
82
10
63
30
7
0
61
1.24
16150--16291
58
2.4
60
88
3
207
35
14
16
33
1.88
16667--16711
3
15.0
3
81
9
56
28
0
2
68
1.01
18974--19110
64
2.2
64
85
4
188
32
19
24
23
1.98
22722--22858
64
2.2
64
86
4
197
32
19
24
23
1.97
24366--24412
2
23.5
2
95
0
85
51
0
0
48
1.00
27242--27299
17
3.2
19
71
28
63
3
12
31
53
1.54
29226--29278
25
2.1
25
100
0
106
54
0
30
15
1.41
30839--30887
20
2.5
19
83
9
62
44
4
2
48
1.33
34350--34408
2
29.5
2
100
0
118
49
0
0
50
1.00

Tables:   1

The End!