Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004273.1 Hibiscus syriacus cultivar Beakdansim tig00009367_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49032

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2230--2331
4
26.0
4
69
10
52
67
2
8
20
1.31
2279--2303
10
2.5
10
100
0
50
80
0
8
12
0.92
2596--2625
2
15.0
2
100
0
60
50
0
0
50
1.00
4494--5160
105
6.3
105
95
0
1172
24
17
24
33
1.96
16476--16577
4
26.0
4
69
10
52
67
2
8
20
1.31
16525--16549
10
2.5
10
100
0
50
80
0
8
12
0.92
16831--16883
2
26.0
2
96
3
97
49
1
0
49
1.12
32157--32284
64
2.0
64
89
3
195
36
18
14
30
1.90
37283--37320
16
2.4
16
100
0
76
34
18
18
28
1.95
41882--41945
25
2.5
24
78
9
65
42
3
4
50
1.39
42791--42869
23
3.2
23
70
16
68
59
3
2
34
1.29
42791--42871
28
3.1
28
61
23
66
60
3
2
33
1.27
43328--43361
6
5.7
6
92
0
59
20
50
0
29
1.49
45295--45328
2
17.0
2
100
0
68
50
0
0
50
1.00
48021--48046
13
2.0
13
100
0
52
46
0
0
53
1.00

Tables:   1

The End!