Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004274.1 Hibiscus syriacus cultivar Beakdansim tig00009368_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85731

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
830--948
34
3.4
36
86
9
174
44
18
5
31
1.71
5385--5503
35
3.3
37
88
5
163
44
19
5
30
1.74
9854--9882
2
14.5
2
100
0
58
0
51
0
48
1.00
13507--13555
25
2.0
25
100
0
98
22
8
12
57
1.61
17296--17326
13
2.4
13
100
0
62
45
25
12
16
1.83
31360--31402
21
2.0
22
81
4
52
55
2
11
30
1.48
31789--31827
14
2.8
14
84
0
51
35
28
12
23
1.91
44492--44540
23
2.1
23
100
0
98
20
30
4
44
1.70
51710--51773
24
2.7
23
79
16
69
51
0
0
48
1.00
51756--51862
30
3.6
30
70
16
89
47
0
0
50
1.13
51755--51860
55
2.0
55
85
9
148
47
0
0
50
1.13
51909--51976
19
3.6
18
74
18
59
50
1
1
47
1.19
52082--52132
27
1.9
26
84
11
68
54
1
0
43
1.11
55505--55617
44
2.6
44
83
5
140
31
20
17
30
1.96
55611--55635
13
1.9
13
100
0
50
40
32
16
12
1.84
65211--65260
24
2.1
24
100
0
100
38
8
22
32
1.83
68671--68704
16
2.1
16
94
0
59
41
11
14
32
1.82
69203--69245
13
3.3
13
78
12
52
44
0
9
46
1.35
74898--74945
2
24.0
2
100
0
96
50
0
0
50
1.00
75284--75331
20
2.4
20
100
0
96
45
14
14
25
1.83

Tables:   1

The End!