Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004281.1 Hibiscus syriacus cultivar Beakdansim tig00009385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51263

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
823--998
58
3.0
60
73
12
177
31
18
7
41
1.80
3738--3922
93
2.0
91
94
5
329
31
11
21
35
1.90
4228--4274
25
2.0
23
84
12
60
42
0
6
51
1.27
7623--7653
16
1.9
16
93
0
53
38
9
12
38
1.77
7680--7725
20
2.3
20
96
0
83
30
21
13
34
1.91
8257--8357
52
2.0
52
94
2
177
52
7
0
38
1.37
8984--9035
21
2.4
21
83
6
59
53
0
9
36
1.34
16300--16412
20
5.4
21
82
12
144
38
27
19
15
1.91
16314--16412
22
4.7
21
81
10
123
37
27
19
16
1.92
16300--16412
42
2.7
42
85
12
144
38
27
19
15
1.91
16487--16566
6
13.5
6
98
1
153
32
51
16
0
1.45
17063--17155
6
16.5
6
98
1
144
0
17
53
29
1.44
23858--23948
46
2.0
46
93
2
157
27
26
19
26
1.99
31615--31652
20
1.9
20
94
0
67
13
26
39
21
1.89
33579--33621
21
2.0
21
86
0
59
30
27
25
16
1.97
34819--34871
24
2.2
24
83
9
65
28
1
26
43
1.65
34989--35200
103
2.1
102
91
0
352
27
13
22
36
1.92
35230--35284
23
2.4
23
81
6
67
23
21
23
30
1.99
50439--50475
2
18.5
2
100
0
74
51
0
48
0
1.00

Tables:   1

The End!