Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004282.1 Hibiscus syriacus cultivar Beakdansim tig00009386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87077

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17960--17996
10
3.7
10
92
7
58
16
51
21
10
1.74
20768--20810
21
2.0
21
81
0
50
34
30
13
20
1.92
24244--24306
30
2.1
30
93
0
108
53
12
6
26
1.62
24967--24993
2
13.5
2
100
0
54
51
0
0
48
1.00
36459--36558
24
4.2
24
82
7
78
43
19
13
25
1.86
36476--36567
24
3.8
24
84
5
123
40
18
15
26
1.90
41265--41366
24
4.2
24
83
7
73
43
19
11
25
1.85
41282--41373
24
3.8
24
88
5
141
40
19
13
27
1.88
44609--44633
13
1.9
13
100
0
50
32
0
16
52
1.44
44873--44917
21
2.1
21
87
0
63
31
28
24
15
1.96
45591--45713
31
4.0
31
95
2
212
19
19
22
38
1.94
49392--49436
21
2.1
21
87
0
63
31
28
24
15
1.96
50112--50234
31
4.0
31
94
2
203
19
18
22
39
1.93
54376--54413
14
2.5
15
87
8
51
50
2
2
44
1.30
61926--61975
22
2.3
22
100
0
100
16
26
16
42
1.88
62109--62150
22
2.0
21
86
13
59
50
2
0
47
1.14

Tables:   1

The End!