Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000429.1 Hibiscus syriacus cultivar Beakdansim tig00000788_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59532

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1072--1105
17
2.1
16
88
5
50
14
8
0
76
1.01
10423--10456
17
2.1
16
88
5
50
14
8
0
76
1.01
17658--17924
138
1.9
140
87
4
389
41
17
12
27
1.86
22562--22612
19
2.6
20
90
3
77
43
5
15
35
1.71
23527--23583
30
1.9
30
85
0
78
59
8
5
26
1.48
27348--27382
16
2.2
16
94
0
61
25
0
0
74
0.82
30474--30532
29
2.0
29
100
0
118
49
13
13
23
1.78
32714--32742
15
1.9
15
100
0
58
13
37
13
34
1.85
34889--34947
29
2.0
29
90
6
93
50
15
10
23
1.74
36085--36142
29
1.9
31
86
6
84
62
3
6
27
1.37
37585--37856
82
3.4
81
80
5
253
25
20
18
36
1.95
37928--38112
55
3.5
55
74
13
181
30
22
17
29
1.97
37974--38361
47
7.7
47
69
13
209
31
20
18
28
1.97
37824--38367
102
5.3
102
86
0
755
32
20
18
29
1.96
38508--38647
62
2.3
62
91
0
226
35
15
20
27
1.93
38618--38704
40
2.2
40
84
8
108
42
19
11
26
1.85
38710--39453
250
3.0
247
86
2
979
34
18
14
31
1.92
40676--40780
40
2.6
40
83
7
115
31
24
13
30
1.93
48915--48946
15
2.1
15
100
0
64
59
0
6
34
1.23
50417--50462
23
2.0
23
91
0
74
13
10
21
54
1.69
55308--55340
15
2.1
16
94
5
59
6
24
18
51
1.68
56087--56120
16
2.1
16
88
0
50
32
23
11
32
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57362--57415
27
2.0
27
96
0
99
12
22
33
31
1.92

Tables:   1

The End!