Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004291.1 Hibiscus syriacus cultivar Beakdansim tig00009414_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63315

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--73
6
6.0
6
100
0
72
0
66
0
33
0.92
1807--1865
28
2.1
27
87
6
82
33
22
8
35
1.84
6987--7047
30
2.0
30
93
0
104
39
18
9
32
1.83
7399--7441
18
2.4
18
80
3
52
37
6
2
53
1.41
7916--7991
33
2.3
32
80
10
82
55
3
3
36
1.37
8376--8409
17
1.9
18
88
5
52
44
0
0
55
0.99
9023--9055
17
1.9
17
100
0
66
48
0
0
51
1.00
15820--15920
47
2.2
47
96
1
186
47
5
8
37
1.59
21366--21411
2
23.5
2
95
4
85
52
0
0
47
1.00
21724--21790
27
2.4
28
80
10
73
53
2
4
38
1.36
22399--22428
16
1.9
15
93
6
51
36
6
0
56
1.26
30335--30377
23
1.9
22
85
4
59
53
2
0
44
1.13
31934--32140
104
2.0
103
97
0
387
22
17
15
44
1.86
35679--35714
2
18.0
2
100
0
72
50
0
0
50
1.00
38771--38809
14
2.7
15
88
4
53
53
0
2
43
1.14
55953--56011
30
2.0
30
100
0
118
33
3
13
49
1.59
61096--61168
31
2.4
30
75
11
76
35
4
0
60
1.16
61457--61548
31
3.0
31
78
7
82
26
21
9
42
1.84

Tables:   1

The End!