Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004304.1 Hibiscus syriacus cultivar Beakdansim tig00009438_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71008

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14475--14522
12
4.1
12
84
13
55
0
22
0
77
0.78
14473--14522
17
3.0
17
88
2
66
0
22
0
78
0.76
22235--22426
76
2.5
76
96
0
357
25
2
13
59
1.44
23057--23106
26
2.0
25
81
14
59
24
6
0
70
1.10
28638--28678
5
8.0
5
84
15
57
17
2
0
80
0.82
28638--28679
16
2.7
16
92
3
68
16
2
0
80
0.81
30642--30759
51
2.3
51
94
4
202
23
1
13
61
1.42
30670--30758
19
5.1
18
68
22
57
22
2
10
65
1.34
31380--31421
17
2.4
18
92
4
68
23
4
0
71
1.05
31465--31516
16
3.2
17
73
15
56
23
3
0
73
1.00
32211--32326
7
15.9
7
69
18
58
50
2
6
40
1.40
32267--32316
5
10.0
5
78
8
57
54
4
2
40
1.31
32211--32326
55
2.1
55
81
9
130
50
2
6
40
1.40
32768--32975
113
1.8
112
90
1
335
24
10
14
50
1.73
36825--36865
3
13.3
3
85
14
57
65
2
0
31
1.05
37318--37385
28
2.4
27
76
11
75
51
11
13
23
1.73
37823--37923
36
3.0
36
71
21
99
43
10
17
27
1.83
38170--38272
36
2.8
36
82
7
120
34
12
19
33
1.89
38288--38448
36
4.4
37
77
12
145
37
11
16
34
1.85
38307--38456
71
2.1
71
81
5
176
38
10
17
33
1.84
38752--38967
4
54.0
4
92
0
342
29
0
20
49
1.53
47858--47887
15
1.9
16
93
6
53
66
3
0
30
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48042--48157
43
2.8
40
76
12
119
25
18
32
24
1.97
48332--48399
28
2.4
28
80
4
84
52
14
10
22
1.71
48819--48938
36
3.5
36
68
23
105
41
10
18
30
1.83
49329--49447
36
3.3
36
77
11
120
36
13
14
36
1.85
49766--51468
4
427.2
4
96
0
3148
25
0
24
50
1.52
54511--54535
13
1.9
13
100
0
50
40
24
8
28
1.83
55126--55154
14
2.0
15
93
6
51
13
20
3
62
1.46
55459--55516
7
8.1
7
79
11
55
37
0
1
60
1.07
55462--55516
27
2.0
27
85
7
74
36
0
1
61
1.06
55478--55516
20
2.0
19
90
5
60
35
0
0
64
0.94
55479--55522
20
2.2
20
84
8
54
38
0
2
59
1.10
55812--55858
22
2.1
22
92
0
76
17
34
0
48
1.47
57434--57500
34
1.9
34
82
14
84
50
19
8
20
1.74
57701--57732
15
2.1
15
94
0
55
18
28
18
34
1.95
61732--61787
16
3.5
16
92
0
94
28
25
14
32
1.94
64157--64687
261
2.0
261
99
0
1048
32
22
17
27
1.96
64682--64921
121
2.0
121
98
0
462
31
22
12
33
1.91
65713--65811
35
2.7
36
85
6
137
46
16
5
32
1.68
70185--70300
35
3.2
36
85
4
155
43
18
3
33
1.67
70235--70298
20
3.4
20
66
29
59
46
18
3
31
1.65

Tables:   1

The End!