Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004312.1 Hibiscus syriacus cultivar Beakdansim tig00009457_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41843

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3186--3220
17
2.1
17
88
0
52
45
5
37
11
1.64
3697--3724
8
3.5
8
100
0
56
39
0
10
50
1.37
7220--7287
29
2.4
28
76
18
77
76
0
14
8
1.01
7256--7323
19
3.7
19
75
16
65
67
0
22
10
1.20
7256--7364
19
5.9
19
71
19
63
70
0
19
9
1.19
7238--7351
14
7.8
14
67
19
54
71
0
20
7
1.17
7220--7363
65
2.2
64
78
12
154
72
0
17
9
1.13
8646--8717
37
2.0
36
94
2
126
36
20
22
20
1.96
8732--9152
55
7.7
55
81
9
387
29
15
24
30
1.96
8783--9143
166
2.2
166
87
5
514
29
15
23
31
1.96
8732--9143
111
3.8
110
79
8
394
29
15
23
30
1.96
12320--12361
19
2.2
19
84
16
52
38
0
2
59
1.10
13275--13299
13
1.9
13
100
0
50
56
4
8
32
1.47
28389--28430
3
14.0
3
100
0
84
33
0
0
66
0.92
28585--28650
21
3.1
21
93
0
114
31
25
19
22
1.98
31282--31372
34
2.6
34
89
5
130
54
6
9
28
1.58
32491--32622
35
3.8
34
76
14
119
20
28
18
32
1.96

Tables:   1

The End!