Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004319.1 Hibiscus syriacus cultivar Beakdansim tig00009470_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65315

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4093--4186
2
48.0
2
87
4
138
52
1
1
45
1.15
5960--5997
19
2.0
20
84
5
51
63
2
31
2
1.22
12218--12255
20
1.9
20
88
0
58
26
28
13
31
1.93
13271--13325
21
2.6
21
94
0
92
27
49
3
20
1.65
20436--20485
21
2.3
21
96
3
91
60
8
6
26
1.48
37606--37663
30
2.0
29
82
3
71
51
0
1
46
1.11
39151--39190
15
2.7
15
92
3
64
35
20
15
30
1.93
45659--45751
20
4.6
20
75
7
89
33
27
17
21
1.96
46199--46289
19
4.4
20
76
17
105
30
27
5
36
1.80
46210--46291
44
1.9
41
87
7
119
32
28
6
32
1.82
52675--52720
20
2.3
20
85
7
58
10
15
17
56
1.67
56944--57258
131
2.4
131
78
2
319
31
16
19
32
1.94
57597--58163
45
12.7
45
83
3
644
41
20
14
22
1.89
57622--58163
89
6.1
90
84
3
657
42
20
15
22
1.89
57597--58163
134
4.2
135
82
3
644
41
20
14
22
1.89
58183--58270
36
2.4
37
82
1
106
48
15
13
21
1.80
58251--58344
36
2.6
37
80
10
120
46
14
21
17
1.83
60992--61048
22
2.8
20
82
10
69
24
22
15
36
1.94
61009--61065
22
2.6
22
97
0
105
28
15
15
40
1.88

Tables:   1

The End!