Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004329.1 Hibiscus syriacus cultivar Beakdansim tig00009489_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38484

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
780--824
20
2.1
22
88
8
67
35
13
6
44
1.70
2394--2441
23
2.1
23
100
0
96
47
4
12
35
1.60
2922--2959
16
2.3
17
86
13
53
68
10
18
2
1.30
10682--10765
35
2.4
37
86
6
120
33
36
2
27
1.70
10715--10761
11
4.1
11
80
20
60
36
36
2
25
1.68
10715--10761
24
2.0
24
84
15
64
36
36
2
25
1.68
11999--12076
36
2.2
35
88
2
111
28
3
38
29
1.75
16147--16226
36
2.2
36
91
2
126
27
5
37
30
1.78
16566--16614
19
2.5
20
86
3
64
46
6
14
32
1.69
21451--21510
25
2.5
24
81
5
75
63
13
16
6
1.50
22810--22864
24
2.3
25
81
6
60
32
16
21
29
1.95
29166--29229
11
5.7
11
79
15
53
0
20
1
78
0.84
29154--29210
27
2.1
27
83
6
71
3
19
1
75
1.04
29183--29230
19
2.6
19
90
9
73
0
20
4
75
0.97
32250--32287
19
2.1
19
85
9
53
36
5
18
39
1.73
33860--33899
5
7.6
5
89
10
62
2
17
0
80
0.83

Tables:   1

The End!