Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000433.1 Hibiscus syriacus cultivar Beakdansim tig00000795_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46893

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2226--2321
46
2.1
47
86
2
131
17
5
26
51
1.67
4583--4643
31
2.0
31
90
6
97
36
8
14
40
1.76
5020--5055
15
2.4
15
100
0
72
27
22
22
27
1.99
5482--5531
16
3.1
16
85
8
66
26
24
8
42
1.82
10380--10443
22
3.2
22
64
35
63
32
10
23
32
1.89
10386--10448
19
3.4
19
66
33
55
33
11
23
31
1.90
10380--10458
37
2.1
37
95
0
140
31
12
22
32
1.92
11636--11710
20
3.8
20
80
1
80
37
16
8
38
1.78
14377--14442
23
2.8
23
78
15
64
43
1
3
51
1.26
14505--14546
21
2.0
21
86
4
59
42
0
0
57
0.99
15240--15288
25
2.0
25
87
0
71
32
30
0
36
1.58
19880--19972
46
2.0
46
87
6
134
17
6
26
49
1.70
20382--20708
55
6.0
55
84
4
398
28
25
18
27
1.98
20393--20693
165
1.8
165
86
1
442
28
25
18
27
1.98
22099--22145
24
2.0
24
100
0
94
2
21
0
76
0.89
22153--22191
12
3.4
11
82
10
51
5
12
0
82
0.83
22116--22188
26
2.9
25
78
9
69
8
13
0
78
0.97
31847--31944
45
2.1
47
84
5
128
39
19
12
28
1.88
34693--34788
46
2.1
47
88
2
140
16
6
26
51
1.68
37072--37132
31
2.0
31
90
6
97
36
8
14
40
1.76
37509--37544
15
2.4
15
100
0
72
27
22
22
27
1.99
37979--38022
16
2.6
18
85
7
65
27
20
9
43
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40714--40745
16
2.0
16
93
0
55
40
18
18
21
1.91
42895--42958
22
3.2
22
64
35
63
32
10
23
32
1.89
42901--42963
19
3.4
19
66
33
55
33
11
23
31
1.90
42895--42973
37
2.1
37
95
0
140
31
12
22
32
1.92

Tables:   1

The End!