Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004330.1 Hibiscus syriacus cultivar Beakdansim tig00009497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77794

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7246--7372
60
2.1
61
86
5
179
33
17
14
33
1.91
7267--7392
60
2.1
60
86
0
171
33
15
14
36
1.88
7837--7954
60
2.0
60
86
6
168
34
20
11
33
1.89
8313--8358
22
2.1
22
88
4
67
32
15
6
45
1.71
10808--10847
18
2.2
18
100
0
80
52
5
37
5
1.45
22899--22980
37
2.2
37
93
0
137
48
4
8
37
1.55
28440--28530
35
2.5
35
89
3
128
45
16
5
32
1.70
32602--32635
16
2.1
17
94
5
61
47
23
0
29
1.52
33028--33149
35
3.4
37
82
7
153
45
18
3
33
1.65
36082--36164
38
2.2
38
97
0
157
31
15
21
31
1.95
36959--36998
21
1.9
21
85
10
55
57
0
5
37
1.21
37515--37720
49
4.2
49
92
0
322
27
21
15
36
1.93
41014--41067
27
2.0
27
85
3
72
12
11
0
75
1.04
49721--49756
13
2.8
13
95
0
63
16
33
30
19
1.94
69696--69737
18
2.3
18
84
8
50
14
40
0
45
1.45
70764--70857
36
2.6
36
98
0
179
19
18
21
41
1.90
75422--75455
2
18.0
2
88
11
54
52
0
0
47
1.00

Tables:   1

The End!