Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004340.1 Hibiscus syriacus cultivar Beakdansim tig00009512_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55907

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6002--6134
68
1.9
70
93
3
234
25
2
15
56
1.51
12651--12694
23
1.9
23
90
9
72
15
9
4
70
1.30
12716--12741
5
5.2
5
100
0
52
19
0
0
80
0.71
15654--15748
39
2.4
39
82
6
104
54
9
13
22
1.67
16627--16733
33
3.2
33
67
15
94
24
3
17
54
1.59
16849--16914
31
2.1
31
83
5
80
21
18
3
57
1.53
17661--17727
26
2.5
26
95
2
116
19
17
1
61
1.43
23406--23447
19
2.2
19
95
0
75
11
35
7
45
1.69
26805--26853
22
2.2
22
92
0
80
40
10
28
20
1.85
31064--31092
15
1.9
15
100
0
58
13
44
27
13
1.82
33160--33226
33
2.0
33
94
0
116
32
13
17
35
1.89
33413--33443
6
5.0
6
92
7
53
83
0
0
16
0.64
33413--33442
13
2.3
13
100
0
60
86
0
0
13
0.57
37291--37332
3
14.0
3
100
0
84
66
0
0
33
0.92
38534--38591
14
4.4
14
77
16
70
56
18
12
12
1.65
38534--38584
24
2.1
24
88
0
75
56
19
11
11
1.65
41062--41103
18
2.4
17
88
11
66
16
9
26
47
1.77
43986--44496
44
11.6
44
68
4
224
29
17
21
32
1.96
43932--44497
132
4.3
132
85
0
720
30
17
20
31
1.96
46416--46511
17
5.6
17
69
8
61
1
18
3
77
0.97
47388--47450
31
2.1
29
85
5
81
55
9
17
17
1.67
49454--49514
16
3.9
15
75
12
52
73
11
1
13
1.16

Tables:   1

The End!