Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004342.1 Hibiscus syriacus cultivar Beakdansim tig00009515_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99910

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7089--7120
14
2.1
16
88
11
50
28
6
12
53
1.62
11119--11153
17
2.1
17
94
0
61
31
8
20
40
1.82
14046--14107
31
2.1
31
82
11
76
38
6
25
29
1.81
16318--16342
13
1.9
13
100
0
50
40
12
24
24
1.88
23861--24170
45
6.9
45
91
1
478
30
17
9
42
1.81
23861--24208
135
2.6
135
88
1
446
30
18
9
41
1.83
24628--24669
22
1.9
22
85
9
59
26
28
14
30
1.95
24618--24834
95
2.3
95
83
6
253
28
25
15
29
1.96
34864--34905
18
2.3
19
87
4
59
28
19
11
40
1.87
43280--43405
51
2.4
52
80
7
141
20
11
8
59
1.57
45989--46027
3
13.7
3
84
10
55
30
0
0
69
0.89
45989--46027
8
4.6
9
84
12
55
30
0
0
69
0.89
55567--55620
24
2.2
24
83
0
63
20
20
22
37
1.95
57719--57758
18
2.2
18
90
0
62
32
42
0
25
1.55
59319--59371
3
17.7
3
92
7
90
66
0
1
32
1.03
60611--61019
10
40.9
10
99
0
737
52
20
7
20
1.70
60610--61021
5
82.4
5
84
0
545
52
19
7
20
1.70
61059--61135
30
2.7
27
81
15
84
48
3
1
46
1.28
61059--61135
28
2.7
30
84
8
106
48
3
1
46
1.28
61164--61398
38
6.2
38
85
4
300
40
9
4
45
1.57
61165--61412
75
3.3
74
86
6
306
39
10
4
45
1.56
61164--61414
113
2.2
114
85
8
329
39
9
3
46
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62017--62099
42
2.0
42
90
0
130
28
24
25
21
1.99
62026--62118
42
2.2
42
80
3
107
29
27
18
24
1.98
76813--76874
29
2.2
30
80
11
76
19
0
32
48
1.49
76841--76911
23
3.2
22
75
9
72
22
0
25
52
1.48
76851--76918
21
3.1
21
75
10
73
23
0
25
51
1.48
76847--76918
24
3.2
23
78
11
76
22
0
26
51
1.48
76856--76928
21
3.3
21
68
12
58
30
0
23
46
1.52
77572--77633
20
3.3
19
66
25
51
20
6
16
56
1.62
77538--77637
36
2.9
34
86
8
139
20
7
17
56
1.64
77926--77974
21
2.3
21
96
0
89
32
24
14
28
1.94
95700--95730
7
4.4
7
95
0
53
12
0
35
51
1.40

Tables:   1

The End!