Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004347.1 Hibiscus syriacus cultivar Beakdansim tig00009527_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71246

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
966--1135
58
2.9
58
90
6
247
37
15
14
31
1.88
3379--3418
18
2.2
18
86
8
55
65
0
7
27
1.20
3940--3964
2
12.5
2
100
0
50
52
0
0
48
1.00
4345--4392
2
24.0
2
100
0
96
50
0
0
50
1.00
7760--7877
22
5.4
22
90
0
191
28
29
25
16
1.96
7760--7883
66
1.9
66
94
0
221
29
29
25
16
1.96
9182--9210
2
14.5
2
100
0
58
51
0
0
48
1.00
16629--16673
23
2.0
22
83
12
56
64
4
0
31
1.13
16621--16659
18
2.2
18
95
4
71
64
2
0
33
1.08
16715--16753
10
3.9
10
96
0
69
43
0
35
20
1.52
16708--16757
20
2.5
20
86
0
73
40
0
34
26
1.56
18081--18116
15
2.4
15
90
9
56
50
0
0
50
1.00
25807--25878
20
3.6
20
92
0
117
12
23
19
44
1.85
25870--25922
22
2.4
22
93
0
97
16
16
28
37
1.91
26039--26065
5
5.4
5
100
0
54
37
22
40
0
1.54
26968--27074
2
53.5
2
100
0
214
50
0
0
49
1.00
27340--27441
30
3.4
30
86
1
134
30
28
19
21
1.98
27340--27458
60
2.0
59
80
4
132
32
26
20
20
1.97
27424--27552
63
2.1
61
87
7
188
33
19
20
27
1.96
27427--27554
31
4.1
31
79
11
145
34
20
18
26
1.96
28087--28129
20
2.1
21
87
8
63
32
11
6
48
1.66
28093--28139
20
2.2
20
85
7
58
36
12
6
44
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28561--28605
21
2.1
21
87
0
63
15
24
28
31
1.96
34304--34402
30
3.4
30
80
9
116
30
27
19
23
1.98
34388--34512
31
4.1
31
78
8
132
34
20
17
27
1.95
34385--34507
62
2.0
60
87
6
176
32
20
19
27
1.97
35502--35546
21
2.1
21
87
0
63
15
24
28
31
1.96
36457--36510
21
2.6
21
90
0
90
29
27
12
29
1.94
36434--36518
21
4.1
21
76
3
64
35
25
15
23
1.94
38817--39174
178
2.0
178
97
2
684
40
13
16
29
1.87
43806--43834
14
2.0
15
93
6
51
44
41
0
13
1.44
46877--46908
17
1.9
16
93
6
55
25
18
18
37
1.94
50904--50957
21
2.6
21
82
5
56
35
12
3
48
1.60
51930--51961
16
2.0
16
93
0
55
6
21
31
40
1.78
52165--52207
21
2.0
21
100
0
86
23
13
13
48
1.79
66262--66313
20
2.5
21
84
6
70
40
7
17
34
1.78

Tables:   1

The End!