Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000435.1 Hibiscus syriacus cultivar Beakdansim tig00000797_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41963

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6540--6620
23
3.8
21
75
12
58
24
29
24
20
1.99
6540--6602
23
2.8
23
82
2
74
23
30
23
22
1.99
9120--9172
21
2.5
22
93
6
99
16
32
24
26
1.97
11082--11158
23
3.3
23
85
5
93
18
24
19
37
1.94
11097--11194
46
2.1
46
78
0
106
22
21
19
36
1.95
11127--11202
23
3.3
23
74
1
64
21
19
23
35
1.96
12981--13024
20
2.2
20
91
0
70
56
4
13
25
1.56
14019--14230
106
2.0
108
89
1
329
36
9
12
41
1.76
15329--15652
75
4.3
75
86
1
407
34
14
11
40
1.81
17031--17060
4
7.5
4
100
0
60
23
0
0
76
0.78
27288--27312
2
12.5
2
100
0
50
0
48
0
52
1.00
40074--40110
5
7.2
5
90
3
56
75
2
2
18
1.04

Tables:   1

The End!