Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004351.1 Hibiscus syriacus cultivar Beakdansim tig00009533_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89537

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31842--31885
23
1.9
23
90
0
70
34
20
18
27
1.96
39967--40004
20
1.9
20
88
0
58
28
26
21
23
1.99
45298--45544
56
4.4
56
86
1
325
31
19
12
35
1.90
45972--46020
20
2.5
20
86
6
64
16
26
18
38
1.91
49610--49716
53
2.0
53
96
0
196
27
16
14
41
1.88
52575--52748
90
2.0
88
90
2
276
46
6
10
36
1.65
55918--55958
20
2.0
20
95
0
73
26
36
26
9
1.88
55992--56036
23
2.0
23
86
0
63
20
40
24
15
1.91
57270--57485
117
1.8
118
79
8
253
50
7
17
25
1.72
63831--63868
19
2.0
20
89
5
60
23
36
26
13
1.91
72412--72443
12
2.7
12
100
0
64
37
9
6
46
1.61
79270--79320
17
3.0
17
100
0
102
41
5
23
29
1.78
88526--88574
3
17.0
3
83
8
66
30
0
0
69
0.89
89146--89179
18
1.9
17
88
5
50
20
5
5
67
1.33

Tables:   1

The End!