Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004360.1 Hibiscus syriacus cultivar Beakdansim tig00009551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53046

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2352--2424
30
2.6
29
85
10
98
52
0
8
39
1.32
12181--12217
18
2.1
18
89
0
56
8
29
18
43
1.79
12517--12544
2
14.0
2
100
0
56
50
0
0
50
1.00
17426--17461
19
1.9
18
88
5
54
36
2
19
41
1.66
19189--19222
16
2.0
16
88
11
50
70
0
2
26
1.01
19257--19378
39
3.2
39
74
16
119
49
1
15
33
1.55
19388--19414
2
13.5
2
100
0
54
51
0
0
48
1.00
23149--23191
21
2.0
21
81
4
50
58
4
4
32
1.39
23653--23716
23
2.7
24
73
4
67
9
23
15
51
1.72
25421--25454
17
1.9
18
88
5
52
41
32
2
23
1.69
38986--39010
6
4.2
6
100
0
50
0
16
48
36
1.46
45624--45663
18
2.3
18
87
8
57
67
0
0
32
0.91
45573--45679
17
6.4
16
75
12
63
64
0
3
30
1.17
45567--45663
35
2.9
34
72
4
88
63
1
4
30
1.19
49548--49618
13
5.4
13
75
20
51
33
2
0
63
1.09
49550--49624
26
2.8
26
78
15
91
32
2
0
65
1.07
49521--49639
48
2.4
52
82
12
135
34
2
0
62
1.15
49559--49640
16
5.1
16
71
12
60
30
1
1
67
1.06
50396--50554
49
3.3
46
77
12
115
49
0
1
48
1.13
50520--50567
19
2.6
18
75
15
53
54
0
2
43
1.12
50974--51017
14
3.0
15
73
6
54
31
9
6
52
1.59

Tables:   1

The End!