Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004362.1 Hibiscus syriacus cultivar Beakdansim tig00009555_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82266

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2635--2807
90
1.9
90
94
2
303
43
5
10
39
1.64
5493--5528
18
2.0
18
100
0
72
38
5
44
11
1.63
9466--9630
86
1.9
87
90
3
262
44
6
10
38
1.65
13272--13296
11
2.3
11
100
0
50
0
0
40
60
0.97
21994--22036
20
2.2
20
86
0
59
34
20
11
32
1.89
26286--26471
93
2.0
92
84
7
243
30
15
16
37
1.90
29182--29309
42
3.0
43
76
8
122
25
17
19
37
1.94
29438--29517
20
3.9
20
68
18
56
27
16
17
38
1.91
29730--29813
36
2.3
36
89
0
123
29
20
11
38
1.88
30053--30103
17
3.1
17
72
16
61
45
9
21
23
1.82
30181--30495
118
2.7
119
90
1
499
39
14
21
24
1.91
30617--30678
3
21.0
3
86
3
81
27
1
0
70
0.96
32954--32987
13
2.6
13
100
0
68
47
11
0
41
1.40
34589--34670
41
2.0
42
83
7
105
29
20
18
31
1.96
34822--35018
74
2.7
75
86
3
260
32
19
8
38
1.83
34812--34944
37
3.6
38
71
11
114
34
18
11
36
1.86
35482--35546
20
3.3
20
64
12
53
41
12
24
21
1.87
36731--36771
22
1.9
22
85
5
57
21
2
7
68
1.26
43972--44022
20
2.4
22
83
6
61
52
5
17
23
1.66
45700--46068
131
2.8
132
75
4
343
40
15
10
33
1.81
46755--46866
6
18.2
6
75
18
88
3
16
0
78
0.94
46755--46866
26
4.5
26
73
17
103
3
16
0
78
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46743--46867
67
1.9
65
80
12
148
4
16
1
78
0.98
46758--46867
20
5.6
19
70
25
77
3
16
0
79
0.93
46755--46865
24
4.5
25
78
10
104
3
17
0
78
0.95
64137--64502
132
2.8
131
80
5
402
40
15
9
33
1.80
67346--67389
21
2.1
21
86
0
61
34
4
0
61
1.16
70256--70297
18
2.2
20
88
12
63
50
4
4
40
1.45
74069--74118
3
16.0
3
79
8
55
66
0
2
32
1.03
74077--74112
10
3.7
10
92
3
56
66
0
0
33
0.92
74069--74118
13
4.0
12
80
10
55
66
0
2
32
1.03
74744--74821
20
3.8
19
74
14
66
33
23
19
24
1.97
75135--75193
17
3.5
17
68
13
50
30
13
8
47
1.73
76480--76531
21
2.7
20
75
21
56
48
3
26
21
1.67
77607--77648
17
2.5
17
88
0
57
30
14
14
40
1.85
80685--80725
2
20.5
2
100
0
82
0
0
48
51
1.00

Tables:   1

The End!