Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004365.1 Hibiscus syriacus cultivar Beakdansim tig00009564_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59936

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1542--1586
21
2.1
21
87
0
63
31
24
22
22
1.99
2680--2762
40
2.1
40
95
0
148
21
43
13
21
1.87
2753--2811
28
2.1
29
90
3
93
11
23
28
35
1.91
6549--6713
80
2.1
80
86
3
226
33
2
21
41
1.66
6790--6845
27
2.0
28
86
3
78
46
3
0
50
1.19
10195--10231
2
18.5
2
100
0
74
51
0
48
0
1.00
14253--14629
150
2.5
148
79
4
409
26
20
20
32
1.97
29660--29706
2
23.5
2
100
0
94
51
0
0
48
1.00
30897--31423
157
3.4
156
86
4
735
27
21
5
45
1.73
31702--31728
2
13.5
2
100
0
54
51
0
0
48
1.00
35435--35462
2
14.0
2
100
0
56
50
0
0
50
1.00
35984--36027
23
1.9
23
85
0
61
22
9
20
47
1.78
36486--36566
31
2.6
31
92
0
126
45
11
18
24
1.82
44906--44970
19
3.4
19
72
10
60
53
1
0
44
1.09
48448--48634
96
1.9
96
87
0
275
25
13
36
24
1.92
53381--53422
21
2.0
21
81
9
50
59
4
2
33
1.31

Tables:   1

The End!