Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004368.1 Hibiscus syriacus cultivar Beakdansim tig00009570_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56689

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1279--1345
34
2.0
34
96
0
125
37
20
7
34
1.81
1363--1483
62
2.0
60
93
3
206
32
21
16
29
1.95
1871--1915
22
2.0
22
82
0
54
44
2
2
51
1.26
4027--4052
8
3.2
8
100
0
52
38
11
15
34
1.83
5607--5668
23
2.7
23
85
7
83
25
19
20
33
1.96
9632--9680
21
2.3
21
85
0
62
26
16
16
40
1.89
9751--9801
23
2.2
24
82
3
59
23
19
23
33
1.97
10955--11032
30
2.5
31
93
2
131
50
3
1
44
1.28
11008--11052
19
2.4
19
85
10
58
48
8
2
40
1.47
15736--15776
18
2.3
18
91
4
66
29
4
2
63
1.28
15846--16058
110
1.9
111
97
0
401
37
7
10
44
1.68
17733--17771
9
4.3
9
86
0
60
33
23
33
10
1.88
24853--24893
10
4.1
10
83
0
55
29
29
0
41
1.56
24933--24973
18
2.3
18
91
4
66
29
4
2
63
1.28
26988--27022
15
2.3
15
90
0
52
31
8
37
22
1.85
27139--27210
26
3.0
24
68
27
62
26
6
4
62
1.39
31213--31253
19
2.1
19
86
9
55
48
4
4
41
1.46
47208--47308
46
2.2
46
91
3
159
24
5
18
50
1.69
52297--52341
6
7.7
6
87
5
65
73
0
11
15
1.10
52298--52341
23
1.9
23
100
0
88
72
0
11
15
1.11
52298--52334
11
3.3
11
88
3
56
70
0
13
16
1.17
52290--52350
6
9.8
6
81
12
52
73
0
9
16
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52651--52881
114
2.0
114
93
0
390
26
22
12
38
1.90

Tables:   1

The End!