Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004377.1 Hibiscus syriacus cultivar Beakdansim tig00009596_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67132

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2980--3053
23
3.2
24
74
9
57
41
1
2
54
1.23
6333--6421
31
2.9
31
84
3
117
48
0
15
35
1.46
32207--32269
24
2.7
24
85
2
92
34
23
19
22
1.96
32264--32312
24
2.1
23
88
7
73
30
18
26
24
1.98
32430--32489
15
4.0
15
84
0
75
40
23
6
30
1.80
33116--33160
21
2.2
20
84
11
56
33
22
11
33
1.89
34873--34982
24
4.6
24
76
10
102
47
17
15
20
1.83
34877--34968
12
7.8
12
71
16
66
47
18
15
18
1.82
34875--34965
47
1.9
48
84
10
125
48
17
15
18
1.82
36061--36098
18
2.1
18
90
0
58
28
18
0
52
1.45
45284--45354
37
1.9
37
97
0
133
25
15
30
28
1.96
49856--49998
69
2.0
74
86
8
206
50
0
2
46
1.21
53683--53751
31
2.3
29
78
9
75
53
10
13
23
1.69
61833--61871
19
2.1
19
85
0
51
33
2
7
56
1.41
62748--62791
18
2.4
18
84
0
70
18
47
25
9
1.77
62810--62889
29
2.8
29
94
0
142
21
10
22
46
1.81

Tables:   1

The End!