Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000438.1 Hibiscus syriacus cultivar Beakdansim tig00000802_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69177

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12009--12033
2
12.5
2
100
0
50
48
0
0
52
1.00
27192--27224
15
2.2
15
100
0
66
24
18
12
45
1.83
28096--28135
2
20.0
2
100
0
80
50
0
0
50
1.00
28249--28283
18
1.9
18
88
0
52
28
5
17
48
1.69
32885--32964
28
2.8
29
92
7
137
43
16
22
17
1.87
33346--33401
22
2.5
22
94
0
103
33
10
10
44
1.74
35653--35702
23
2.2
23
85
0
64
42
8
10
40
1.68
41111--41147
20
1.9
19
89
10
58
45
5
24
24
1.74
41296--41370
37
2.1
36
87
2
105
48
2
0
49
1.15
41899--41930
2
16.0
2
100
0
64
50
0
0
50
1.00
46881--46931
25
2.0
25
100
0
102
23
3
15
56
1.56
50026--50074
20
2.5
20
93
0
80
36
22
24
16
1.94
50403--50467
14
4.6
14
73
17
55
27
0
29
43
1.56
50457--50504
21
2.3
21
81
0
60
25
0
27
47
1.52
50395--50502
35
3.1
35
78
7
121
25
0
28
45
1.54
52194--52270
26
3.0
26
94
0
136
0
22
23
54
1.45
52641--52677
17
2.2
17
95
0
65
24
16
29
29
1.96
52662--52714
12
4.6
11
86
4
52
32
24
20
22
1.98
52671--52715
12
3.8
12
88
11
67
35
26
17
20
1.95
53861--53907
19
2.6
18
83
12
60
80
8
4
6
1.00
53875--53913
17
2.4
15
84
16
51
84
10
2
2
0.81
56443--56470
6
4.7
6
100
0
56
28
0
0
71
0.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59520--59704
74
2.5
74
86
1
235
24
19
27
29
1.98
61838--61881
13
3.4
13
87
6
63
45
9
11
34
1.72
62351--62410
23
2.7
23
92
2
95
35
16
26
21
1.95
68150--68334
74
2.5
74
86
1
244
24
20
27
28
1.99

Tables:   1

The End!