Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004381.1 Hibiscus syriacus cultivar Beakdansim tig00009607_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53845

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3235--3284
20
2.5
20
80
12
57
40
12
10
38
1.76
26160--26202
21
2.0
21
86
0
59
30
27
25
16
1.97
26227--26268
22
1.9
22
90
0
66
26
30
33
9
1.88
26750--26975
103
2.2
103
92
1
391
26
11
23
38
1.89
26984--27035
23
2.3
23
89
0
77
21
30
25
23
1.99
26983--27046
23
2.8
23
78
4
76
21
26
25
26
2.00
33110--33149
21
1.9
21
84
0
53
30
30
22
17
1.97
33176--33213
20
1.9
20
88
0
58
23
34
31
10
1.89
33695--33912
103
2.1
103
98
0
418
24
12
24
38
1.90
33937--33991
23
2.4
23
90
0
83
20
25
27
27
1.99
34698--34746
24
2.0
24
100
0
98
63
4
12
20
1.45
34860--34909
2
25.5
2
87
4
75
46
0
0
54
1.00
34992--35024
4
8.2
4
100
0
66
27
0
24
48
1.51
35277--35529
30
8.4
30
95
0
452
24
18
23
33
1.97
38937--39072
64
2.1
62
82
9
159
35
19
22
23
1.96
40138--40210
31
2.4
31
83
4
85
28
16
19
35
1.93
40216--40498
30
9.4
30
94
0
494
24
18
23
33
1.97
47997--48032
14
2.6
14
100
0
72
19
8
36
36
1.82
47997--48040
14
3.1
14
93
0
61
20
9
36
34
1.84
52951--52985
13
2.7
13
90
0
61
28
5
28
37
1.80

Tables:   1

The End!