Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004384.1 Hibiscus syriacus cultivar Beakdansim tig00009612_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72570

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--163
16
2.1
16
100
0
66
12
18
27
42
1.85
2258--2290
16
2.1
16
100
0
66
33
36
6
24
1.80
6279--6339
18
3.5
17
76
10
61
73
1
16
8
1.14
8455--8500
21
2.2
21
88
7
67
41
15
6
36
1.73
10599--10635
14
2.6
14
86
0
56
32
0
40
27
1.57
14360--14522
90
1.8
89
93
1
281
44
6
11
36
1.67
16561--16606
15
2.9
15
81
18
58
8
30
0
60
1.26
25597--25676
20
3.8
21
77
11
74
23
37
25
13
1.92
27921--27960
19
2.0
20
95
4
73
40
0
20
40
1.52
29958--29993
19
1.9
18
88
5
54
41
5
13
38
1.68
33643--33671
15
2.0
15
93
6
51
0
20
3
75
0.94
37927--37955
15
2.0
15
93
6
51
0
20
3
75
0.94
44292--44324
17
1.9
17
100
0
66
42
0
30
27
1.56
46050--46089
19
2.0
20
90
4
64
20
15
0
65
1.28
46352--46416
19
3.5
18
79
10
60
75
4
16
3
1.10
52021--52046
5
5.2
5
100
0
52
23
57
19
0
1.40
54858--54891
16
2.2
16
89
5
52
0
20
0
79
0.73
54880--54933
23
2.2
25
87
6
76
9
16
12
61
1.56
60861--60940
35
2.2
37
91
4
128
27
3
37
31
1.74
67316--67358
15
2.9
15
82
6
52
16
9
4
69
1.31
67925--67981
19
3.1
18
75
10
53
80
1
15
1
0.87
67924--67999
29
2.5
30
72
18
77
75
5
15
3
1.14

Tables:   1

The End!