Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004386.1 Hibiscus syriacus cultivar Beakdansim tig00009617_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67248

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4147--4196
20
2.5
20
100
0
100
34
28
14
24
1.93
5582--5607
12
2.2
12
100
0
52
50
26
7
15
1.71
17345--17377
15
2.1
16
88
5
50
30
15
18
36
1.91
26746--26782
19
2.0
19
89
5
58
29
2
13
54
1.53
26766--26860
49
1.9
49
93
4
165
36
2
6
54
1.38
29775--29820
3
15.7
3
90
4
76
63
0
0
36
0.95
30189--30363
91
1.9
92
89
3
273
25
21
13
39
1.90
30282--30838
240
2.3
240
93
0
934
25
20
16
37
1.93
31719--31783
8
8.1
8
79
17
73
10
12
0
76
1.01
31719--31779
18
3.2
18
86
9
77
9
13
0
77
1.00
44901--44982
3
27.7
3
92
2
139
63
0
0
36
0.95
46397--46435
20
2.0
20
84
0
51
25
30
15
28
1.96
48085--48122
18
2.1
18
90
0
58
0
42
2
55
1.14
49770--49856
31
3.0
30
77
14
92
40
8
11
40
1.71
58253--58298
17
2.7
17
86
0
65
21
13
6
58
1.57
59410--59451
20
2.0
21
82
13
52
30
2
2
64
1.19
59529--59581
23
2.3
23
84
12
65
71
0
0
28
0.86
65307--65348
22
1.9
22
85
0
57
61
9
4
23
1.45

Tables:   1

The End!