Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004387.1 Hibiscus syriacus cultivar Beakdansim tig00009618_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51800

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9410--9638
120
1.9
121
83
4
302
37
5
27
29
1.80
11347--11568
69
3.2
69
81
3
214
27
26
17
28
1.98
11373--11590
69
3.2
69
78
4
172
27
27
18
26
1.98
11779--12359
76
7.8
76
82
6
580
42
18
9
29
1.81
12190--12312
64
1.9
64
88
0
183
44
20
7
27
1.78
12101--12505
140
2.9
138
80
7
482
42
20
9
27
1.83
12307--12417
58
1.9
58
94
0
195
39
19
11
28
1.87
12365--12548
76
2.4
75
87
3
269
40
18
11
28
1.86
12914--12938
2
12.5
2
100
0
50
48
0
0
52
1.00
19118--19155
16
2.4
17
82
13
53
50
5
10
34
1.59
19542--19629
32
2.8
32
74
8
90
32
17
18
31
1.94
23015--23057
18
2.3
20
80
15
56
30
23
27
18
1.98
23651--23801
65
2.3
64
81
3
169
31
22
19
27
1.98
23893--23922
13
2.3
13
100
0
60
23
36
16
23
1.94
24029--24060
17
1.9
16
93
6
55
62
21
9
6
1.47
29256--29336
23
3.6
22
74
14
76
22
23
22
32
1.98
32349--32396
18
2.8
17
87
12
64
62
14
14
8
1.53
38622--38692
27
2.6
27
76
8
72
36
18
15
29
1.92
39618--39675
29
2.0
29
96
0
107
20
15
20
43
1.88
49748--49983
119
2.0
121
84
1
314
35
7
27
30
1.84

Tables:   1

The End!