Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004390.1 Hibiscus syriacus cultivar Beakdansim tig00009633_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67157

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
446--500
21
2.6
22
82
5
69
34
7
21
36
1.81
461--513
21
2.5
21
85
11
65
33
1
20
43
1.63
512--546
18
1.9
18
88
0
52
28
17
11
42
1.83
851--905
23
2.5
21
77
11
56
36
7
18
38
1.78
870--919
23
2.2
23
89
7
75
34
2
20
44
1.63
1180--1229
25
2.0
25
88
3
75
34
8
20
38
1.82
1763--1887
39
3.2
39
96
1
225
48
20
13
17
1.81
2285--2348
23
2.8
23
87
0
92
35
6
20
37
1.78
2285--2357
23
3.2
23
82
7
85
34
5
20
39
1.76
17600--17630
13
2.4
13
100
0
62
87
0
0
12
0.55
17586--17615
10
3.1
10
95
4
53
73
0
6
20
1.05
30459--30558
47
2.1
47
86
0
137
34
11
6
49
1.63
39131--39191
3
20.3
3
79
0
50
52
34
4
8
1.53
39130--39185
15
3.9
15
76
17
57
50
33
7
8
1.61
39133--39191
12
4.7
12
82
12
73
52
33
5
8
1.54
43412--43466
23
2.3
24
78
15
60
49
10
5
34
1.61
55571--55613
19
2.3
18
84
7
59
65
9
2
23
1.34
55702--55727
5
5.2
5
100
0
52
19
61
19
0
1.35
62128--62240
60
1.9
60
85
3
156
34
16
11
37
1.85

Tables:   1

The End!