Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004391.1 Hibiscus syriacus cultivar Beakdansim tig00009635_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61815

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
857--908
22
2.3
23
80
12
63
69
0
0
30
0.89
877--930
21
2.6
20
80
8
63
61
0
3
35
1.14
1147--1196
14
3.6
14
81
10
59
66
2
0
32
1.03
1633--1717
35
2.4
36
82
3
102
34
9
15
41
1.79
2467--3717
106
11.9
106
89
3
1775
23
17
24
34
1.96
2486--3730
317
4.0
315
89
2
1787
23
17
24
34
1.96
5301--5356
13
3.7
15
84
13
71
3
10
5
80
1.00
5301--5363
16
4.2
15
84
11
69
3
9
6
80
0.98
9800--9948
17
8.8
16
66
27
53
63
1
3
31
1.19
9786--9839
22
2.5
22
80
14
58
64
0
3
31
1.11
9806--9853
14
3.6
14
76
18
50
60
0
2
37
1.09
9821--9986
89
1.8
91
79
15
193
62
1
5
30
1.28
9984--10012
2
14.5
2
100
0
58
51
0
0
48
1.00
10636--10737
37
2.8
37
89
0
141
32
14
12
40
1.84
16419--16488
3
22.7
3
74
11
61
32
4
2
60
1.31
18622--18659
18
2.1
18
90
0
58
52
5
5
36
1.47
19045--19083
18
2.2
18
86
9
53
64
17
0
17
1.30
21129--21185
20
2.7
21
84
13
73
35
14
22
28
1.93
26133--26167
18
1.9
18
88
0
52
51
8
5
34
1.56
27966--28083
35
3.3
35
76
11
123
27
13
19
39
1.89
31118--31169
27
2.0
26
84
3
68
28
17
25
28
1.97
47376--47416
19
2.2
19
90
0
64
48
9
14
26
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47935--47977
22
2.0
22
90
0
68
44
6
6
41
1.58
49372--49553
36
5.1
36
88
8
275
45
2
9
43
1.48
49372--49651
73
3.8
71
80
15
289
45
1
8
44
1.45
49537--49600
17
4.0
17
69
22
57
46
1
7
43
1.42
49478--49565
33
2.8
31
86
10
101
46
2
7
43
1.45
49564--49672
36
3.0
36
77
9
114
44
0
10
44
1.44
49564--49651
36
2.5
36
87
5
117
45
0
7
46
1.32
49786--49831
22
2.0
22
87
4
65
17
6
0
76
1.00
50971--51017
5
9.2
5
77
13
51
19
4
0
76
0.95
50971--51024
15
3.6
14
80
9
54
18
3
1
75
1.03
51121--51145
6
4.2
6
100
0
50
48
0
0
52
1.00
60827--60864
18
2.1
19
85
5
51
26
5
18
50
1.68

Tables:   1

The End!