Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004394.1 Hibiscus syriacus cultivar Beakdansim tig00009638_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67331

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14374--14422
20
2.4
20
80
13
55
38
10
10
40
1.73
21232--21301
3
24.0
3
81
11
83
62
0
1
35
1.04
21655--22144
113
4.4
112
88
3
653
28
19
14
38
1.91
22142--22448
76
4.1
76
94
0
535
34
20
20
24
1.97
23124--23177
21
2.5
22
93
6
101
38
14
11
35
1.82
28126--28175
7
6.9
7
84
6
64
0
20
0
80
0.72
28127--28174
14
3.4
14
94
5
87
0
20
0
79
0.74
28126--28175
15
3.4
15
88
5
84
0
20
0
80
0.72
30126--30153
12
2.3
12
100
0
56
53
7
14
25
1.66
30093--30152
27
2.3
27
79
2
77
60
6
11
21
1.54
30212--30253
7
6.0
7
78
10
50
54
14
16
14
1.71
31743--31809
26
2.7
25
73
13
68
64
1
4
29
1.22
31757--31824
28
2.5
26
83
4
73
60
2
4
32
1.32
32410--32451
20
2.2
19
86
4
57
64
2
0
33
1.07
32323--32555
120
2.0
120
83
5
303
45
8
8
37
1.65
34046--34118
3
25.0
3
82
10
89
63
0
1
35
1.04
36353--36378
11
2.4
11
100
0
52
30
0
0
69
0.89
38212--38269
29
1.9
30
82
6
73
43
5
5
46
1.48
48590--48708
51
2.3
52
81
8
136
38
6
7
47
1.59
49117--49160
23
1.9
23
95
0
79
9
22
18
50
1.75
52588--52630
22
2.0
22
90
4
70
27
13
6
51
1.67
52619--52691
33
2.2
33
90
2
121
31
8
15
45
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53224--53306
22
3.8
22
90
1
132
19
20
16
43
1.88
55066--55106
15
2.7
15
80
20
50
65
4
2
26
1.25
55059--55139
42
1.9
43
85
5
112
65
3
2
28
1.22
55056--55147
41
2.2
41
79
9
107
67
3
2
27
1.18
58648--58699
21
2.5
20
76
14
52
34
7
21
36
1.82
60133--60199
31
2.2
30
81
5
82
47
2
2
46
1.33
60474--60721
87
2.9
87
93
3
430
41
10
14
33
1.80
63060--63096
17
2.1
18
95
5
67
32
24
16
27
1.96
64527--64770
118
2.1
119
92
2
402
38
15
14
31
1.88
64645--65214
179
3.2
178
88
9
821
33
16
15
34
1.90
65574--65624
21
2.4
21
90
0
75
19
29
11
39
1.87

Tables:   1

The End!