Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004406.1 Hibiscus syriacus cultivar Beakdansim tig00009658_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68437

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
443--505
25
2.9
22
78
19
69
31
6
30
31
1.83
479--515
19
1.9
19
94
0
65
37
5
27
29
1.79
1265--1295
13
2.4
13
88
0
53
48
0
0
51
1.00
4512--4603
23
4.0
23
84
2
105
33
25
22
18
1.97
4522--4603
23
3.6
23
89
0
119
31
26
24
17
1.97
9364--9432
14
5.1
14
73
19
67
33
1
17
47
1.56
9359--9401
13
3.3
13
87
9
61
39
0
11
48
1.40
9782--9869
13
7.3
12
70
19
58
51
11
18
19
1.76
9750--10484
46
16.3
45
79
11
586
46
9
20
22
1.80
9981--10131
26
6.3
25
70
18
108
45
9
23
22
1.81
10078--10424
65
5.2
66
77
13
368
44
9
23
22
1.81
9762--10333
20
25.7
20
68
19
214
45
10
22
21
1.81
20174--20234
23
2.8
22
78
9
72
22
32
22
21
1.98
20216--20255
21
1.9
21
85
10
55
25
37
25
12
1.91
24522--25294
46
16.8
46
90
1
1183
47
9
21
22
1.79
25791--25854
2
32.0
2
100
0
128
50
0
0
50
1.00
28368--28420
20
2.7
20
93
0
88
35
37
11
15
1.83
32990--33041
17
2.9
18
81
18
65
73
5
19
1
1.14
32997--33068
11
6.5
11
75
12
58
75
2
20
1
1.01
32992--33065
5
15.8
5
71
18
61
75
2
20
1
1.00
32992--33058
8
7.9
8
74
22
57
74
2
20
1
1.03
32992--33057
16
3.8
17
79
16
66
74
3
21
1
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32992--33065
13
5.3
15
70
16
61
75
2
20
1
1.00
33033--33065
16
2.1
16
94
5
59
78
0
21
0
0.75
39316--39461
74
2.0
74
100
0
292
28
22
24
24
2.00
44177--44222
17
2.8
17
78
12
51
52
2
0
45
1.13
44178--44238
22
2.6
22
76
21
54
52
1
0
45
1.10
47353--47384
14
2.3
14
100
0
64
71
0
15
12
1.14
48141--48201
23
2.7
23
94
0
104
19
27
27
24
1.99
48308--48350
2
21.5
2
100
0
86
48
0
0
51
1.00
51874--51902
13
2.2
13
100
0
58
20
0
6
72
1.07
56141--56452
36
8.9
36
75
11
229
41
6
5
47
1.51
56143--56280
65
2.1
65
86
4
190
37
5
7
50
1.52
56362--56405
22
2.0
22
82
8
54
47
2
2
47
1.27
56226--56449
106
2.1
109
81
7
262
43
5
4
46
1.48
60662--60699
13
2.9
13
100
0
76
55
7
28
7
1.57
63647--63686
17
2.3
18
86
4
55
22
2
2
72
1.09
63792--63831
12
3.2
13
83
16
50
47
5
0
47
1.24

Tables:   1

The End!