Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004408.1 Hibiscus syriacus cultivar Beakdansim tig00009663_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68112

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1024--1078
22
2.3
24
82
17
71
45
3
3
47
1.38
1030--1078
26
1.9
25
84
12
64
46
4
4
44
1.41
1771--1800
15
2.0
15
93
0
51
53
0
3
43
1.17
1777--1827
20
2.4
20
87
9
66
50
0
5
43
1.26
2066--2230
43
3.9
42
79
2
150
29
16
23
30
1.96
2423--2494
28
2.6
28
81
0
81
43
9
13
33
1.77
3123--3290
93
1.8
92
87
6
250
29
13
11
45
1.79
6222--6282
31
2.0
31
90
6
97
40
6
8
44
1.60
6741--6820
18
4.1
20
72
21
62
61
0
1
37
1.04
6810--6841
2
17.0
2
87
12
50
53
0
0
46
1.00
6757--6838
37
2.2
37
82
8
94
57
0
1
41
1.06
6756--6845
39
2.4
36
81
7
99
57
0
1
41
1.06
6918--7023
12
8.7
12
75
18
94
59
0
0
39
1.04
6841--6929
24
3.7
24
95
3
160
50
1
0
48
1.08
6894--6968
39
2.0
39
85
12
104
54
1
0
44
1.08
6870--7023
63
2.5
62
87
9
221
56
0
0
42
1.04
6832--7023
87
2.2
84
83
12
239
55
1
0
43
1.06
6981--7031
12
4.3
12
81
18
63
68
0
0
31
0.90
10065--10139
37
2.0
37
82
5
89
50
4
1
44
1.29
10672--10723
2
26.0
2
100
0
104
50
0
0
50
1.00
13676--13712
18
2.1
18
100
0
74
29
5
5
59
1.42
18450--18841
102
3.8
102
91
1
624
23
34
15
25
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19371--19867
239
2.1
235
93
1
841
27
25
16
29
1.97
25467--25499
3
11.0
3
100
0
66
33
33
0
33
1.58
35679--35740
13
4.6
14
76
10
58
62
0
0
37
0.95
35681--35772
13
7.5
12
71
19
57
61
0
1
36
1.03
35677--35769
17
5.7
17
78
15
83
61
0
1
37
1.03
38257--38325
21
3.5
21
70
22
67
23
24
27
24
2.00
38238--38333
38
2.5
38
89
0
147
23
27
23
25
2.00
44447--44511
17
3.6
17
71
15
58
24
30
24
20
1.98
44464--44532
21
3.5
21
70
22
67
21
26
27
24
1.99
44445--44540
38
2.5
38
93
0
165
22
28
23
25
2.00
45388--45439
21
2.5
21
96
0
95
23
26
17
32
1.96
67050--67135
28
3.1
28
96
1
156
40
20
2
36
1.66

Tables:   1

The End!