Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004420.1 Hibiscus syriacus cultivar Beakdansim tig00009692_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36990

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--44
18
2.3
18
86
0
55
36
0
4
58
1.20
673--708
13
2.5
15
86
13
58
52
0
0
47
1.00
715--759
19
2.4
19
81
7
56
44
0
0
55
0.99
641--768
30
4.1
30
66
22
75
47
0
0
51
1.06
676--766
22
4.3
22
68
20
68
47
0
0
52
1.00
3397--3460
24
2.7
24
80
11
69
54
1
0
43
1.09
3938--3969
14
2.3
15
89
10
50
56
6
0
37
1.25
4240--4398
46
3.5
46
83
2
187
18
12
25
43
1.85
11644--11771
67
1.9
66
85
1
175
46
7
13
32
1.71
21929--21967
20
2.0
20
94
0
69
38
0
23
38
1.55
22538--22614
21
3.8
21
72
17
72
25
35
20
18
1.95
24518--24557
21
1.9
21
90
10
64
55
0
7
37
1.29
28381--28461
23
3.6
23
79
12
105
25
25
19
28
1.99
28356--28479
21
5.8
20
75
19
92
26
24
19
29
1.98
28356--28462
44
2.4
44
86
7
137
27
25
18
28
1.98
32893--32951
30
2.0
29
90
9
93
32
6
16
44
1.74
33040--33064
13
1.9
13
100
0
50
16
40
20
24
1.91
33051--33093
22
1.9
23
85
4
61
23
34
20
20
1.96
33125--33198
21
3.7
21
87
5
91
22
21
25
29
1.99
34258--34331
19
3.9
19
75
6
53
43
6
20
29
1.77
34278--34331
19
2.9
18
72
8
54
46
5
18
29
1.72
35298--35428
41
3.2
40
78
10
115
32
19
21
25
1.97

Tables:   1

The End!