Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004421.1 Hibiscus syriacus cultivar Beakdansim tig00009694_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79229

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--702
19
2.5
19
84
12
59
30
13
23
32
1.93
6469--6643
64
2.7
63
78
10
185
29
17
24
29
1.97
6485--6667
64
2.9
64
76
8
167
29
15
22
31
1.95
9557--9590
17
2.1
17
94
5
61
44
20
0
35
1.52
10013--10073
21
3.2
21
65
26
62
47
16
4
31
1.68
9995--10074
36
2.2
36
93
2
135
45
18
5
31
1.71
32495--32539
21
2.1
21
83
0
54
31
17
2
48
1.59
43692--43778
38
2.3
38
86
7
124
39
36
11
12
1.80
43941--44011
37
1.9
37
94
0
124
43
33
8
14
1.75
43649--44211
248
2.3
239
85
9
766
38
26
11
24
1.89
51294--51370
29
2.7
29
97
0
145
44
7
9
38
1.65
61720--61753
16
2.1
16
94
0
59
29
20
32
17
1.96
69455--69498
16
3.0
14
84
12
61
18
22
11
47
1.80
69466--69498
16
2.1
16
100
0
66
21
24
12
42
1.86
69635--69672
14
2.6
15
83
8
51
36
13
5
44
1.66
75630--75669
20
2.0
20
85
0
53
30
5
22
42
1.75

Tables:   1

The End!