Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004422.1 Hibiscus syriacus cultivar Beakdansim tig00009697_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75668

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--709
12
2.8
12
86
13
52
44
20
0
35
1.52
3670--3700
15
2.1
15
93
0
53
41
3
12
41
1.59
5978--6059
41
2.0
41
88
4
121
21
14
18
45
1.85
30979--31047
22
3.1
22
97
0
129
20
5
27
46
1.73
38557--38589
2
16.5
2
93
0
57
45
0
0
54
0.99
41146--41208
24
2.6
25
94
5
119
20
0
33
46
1.51
41205--41259
26
2.2
25
83
9
67
27
0
23
49
1.51
41213--41269
25
2.2
24
84
9
69
28
0
15
56
1.40
43311--43360
24
2.1
24
84
0
64
34
30
2
34
1.69
56544--56697
36
4.3
36
90
3
229
36
24
20
19
1.95
56543--56732
36
5.2
36
85
4
177
36
22
18
22
1.95
56544--56732
72
2.6
72
83
5
202
36
22
19
21
1.95
57112--57465
51
6.8
51
87
4
435
32
19
25
22
1.97
57465--57614
53
2.8
53
89
2
228
29
12
29
28
1.93
57442--57617
53
3.3
54
83
10
218
30
13
28
27
1.94
65536--65612
28
2.7
28
85
4
109
51
20
0
27
1.47
66527--66565
20
2.0
20
89
0
60
41
5
23
30
1.76
66594--66636
21
2.0
21
95
0
77
13
2
48
34
1.56
66602--66647
21
2.2
21
84
0
56
19
4
43
32
1.71
68944--68998
21
2.6
21
82
0
74
41
14
7
36
1.74
72126--72173
24
2.0
24
88
4
71
14
25
12
47
1.79
72126--72182
24
2.4
23
85
2
69
15
24
17
42
1.88

Tables:   1

The End!