Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004425.1 Hibiscus syriacus cultivar Beakdansim tig00009703_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41953

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20687--20757
23
3.2
23
66
22
60
25
21
21
32
1.98
20660--20762
44
2.3
44
93
0
170
28
21
20
30
1.98
20659--20734
21
3.5
21
68
19
57
30
21
21
27
1.98
26814--26989
90
2.0
90
89
2
273
38
8
6
47
1.59
32886--33063
90
2.0
90
90
0
284
38
12
5
43
1.66
34523--35099
137
4.2
137
90
0
870
31
27
16
24
1.96
35258--35295
3
13.0
3
91
5
51
39
0
0
60
0.97
38829--38869
15
2.6
17
81
11
52
56
4
9
29
1.53
38968--39258
2
146.5
2
65
22
98
48
3
3
44
1.39
38963--39119
13
11.8
13
72
18
92
48
5
3
42
1.43
38975--39037
27
2.2
28
86
13
85
49
4
1
44
1.33
39102--39209
39
2.7
39
84
8
121
49
1
3
45
1.30
39532--39666
2
70.0
2
86
10
192
50
2
0
47
1.13
39834--39942
56
1.9
57
83
9
143
44
8
6
41
1.60
40239--40297
26
2.2
28
90
6
95
49
0
1
49
1.11
41062--41108
6
7.7
6
87
2
67
46
48
0
4
1.21
41062--41108
24
2.0
24
91
0
76
46
48
0
4
1.21
41099--41176
17
4.5
17
76
7
59
42
39
8
8
1.68

Tables:   1

The End!