Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004427.1 Hibiscus syriacus cultivar Beakdansim tig00009708_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54862

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1127--1176
20
2.5
20
87
3
66
40
22
4
34
1.72
2409--2438
14
2.1
14
93
0
51
80
3
16
0
0.85
16834--17466
112
5.7
111
69
14
306
32
14
12
39
1.84
16923--17613
74
9.3
75
84
5
806
32
15
12
39
1.84
17923--18159
91
2.6
91
83
4
262
32
21
16
29
1.95
19347--19402
21
2.7
21
81
13
71
23
8
8
58
1.56
36759--37479
38
19.0
38
78
3
682
24
20
16
38
1.93
36759--37479
76
9.5
76
84
3
862
24
20
16
38
1.93
37469--37705
45
5.3
46
77
6
175
19
17
19
43
1.88
38566--39002
45
9.7
45
86
3
567
29
23
9
37
1.87
49924--49956
17
1.9
17
88
11
50
60
0
3
36
1.12
52038--52079
20
2.2
19
86
4
57
14
9
7
69
1.37

Tables:   1

The End!