Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004436.1 Hibiscus syriacus cultivar Beakdansim tig00009732_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66610

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--708
186
1.8
185
86
8
503
21
10
26
42
1.85
549--938
208
1.9
203
81
9
466
25
11
25
37
1.89
4418--4448
16
1.9
16
93
0
53
61
0
0
38
0.96
17092--17133
14
3.0
14
86
6
50
47
2
0
50
1.14
17099--17131
12
2.6
13
90
4
50
51
0
0
48
1.00
17205--17342
73
1.9
74
83
4
181
25
36
4
33
1.76
36941--36991
16
3.2
16
72
5
50
74
1
19
3
1.07
37359--37395
18
2.1
18
94
0
65
29
16
2
51
1.58
39555--39769
103
2.1
103
97
0
403
26
12
24
36
1.91
39792--39898
47
2.3
46
95
1
187
22
25
24
28
2.00
39796--39903
23
4.7
23
81
2
126
22
24
25
28
1.99
45381--45701
103
3.1
103
95
0
581
25
13
23
36
1.92
45718--45793
23
3.3
23
73
10
82
23
27
25
23
2.00
45711--45827
47
2.5
47
87
1
155
25
23
23
28
1.99
45718--45804
23
3.7
23
73
11
79
25
26
24
24
2.00
45717--45832
23
5.0
22
69
10
70
25
22
24
28
1.99
46739--47079
137
2.5
137
81
4
386
41
14
18
25
1.88
47485--47523
21
1.9
20
84
5
51
66
17
5
10
1.39
50233--50293
30
2.0
32
83
6
81
16
14
31
37
1.89
51093--51118
2
13.0
2
100
0
52
50
0
0
50
1.00
51410--51453
20
2.2
19
84
15
54
43
2
2
52
1.26
58640--58666
14
1.9
14
100
0
54
0
22
0
77
0.76

Tables:   1

The End!